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Healthcare AI Reference Architecture on ibl.ai

Blanca AmigotMay 28, 2026
Premium

A HIPAA-compliant reference architecture for deploying agentic AI in healthcare β€” PHI stays in your perimeter, any LLM routes through your control plane, and audit logs are regulator-ready by design.

Why a reference architecture matters here

Healthcare AI lives or dies on where the data goes. A generic SaaS copilot can be made HIPAA-compliant by paperwork; a reference architecture that keeps PHI inside your perimeter doesn't need paperwork to make the case. This is the architecture we deploy with healthcare customers on ibl.ai.

Components

  • Identity & access β€” SSO (SAML / OIDC), SCIM, MFA, role-based and attribute-based access control at the department, role, and patient-cohort level.
  • Application layer β€” Agentic OS: the agent runtime, workflows, RAG, and admin governance plane.
  • Model layer β€” any open or commercial LLM you choose, routed by cost, latency, and compliance per task. Local models for PHI-heavy workloads; frontier models for low-stakes assistance.
  • Data layer β€” PHI vault and embeddings store in your environment, never leaving the perimeter; access logged per interaction.
  • Integration layer β€” Epic, Cerner / Oracle Health, athenahealth, Meditech via APIs and MCP-based connectors; HL7 / FHIR where applicable.
  • Observability & audit β€” every prompt, retrieval, and model call logged with user, role, and purpose-of-use; retention configured to your compliance program.
  • Deployment β€” Managed VPC for fastest start; on-premise or air-gapped for high-sensitivity workloads.

Data flow (one workflow, end-to-end)

  1. Clinician opens an agent inside the EHR or web app (SSO).
  2. Agent retrieves relevant PHI via the data layer; embeddings and prompts stay inside your environment.
  3. The model call routes to the LLM your policy permits for that workload (local for PHI; managed for low-sensitivity).
  4. Output is shown to the clinician with citations to the underlying records.
  5. The interaction is logged for audit with user/role/patient-cohort tags.

Sovereignty benchmark (vs. a per-seat SaaS copilot)

Controlibl.ai (this architecture)Typical SaaS copilot
Where PHI is processedYour environmentVendor cloud
Air-gap optionYesNo
Model choiceAny LLM, switch anytimeVendor's models
Source-code ownershipPerpetual licenseRented access
Audit logsInside your perimeterVendor's logs under BAA
Per-seat pricingNoneYes

TCO snapshot (10,000-clinician system)

A per-clinician AI assistant at ~$30/seat/month = $3.6M/year. The same workforce on a flat-rate ibl.ai platform (Pro/Enterprise) + LLM usage typically lands in the mid-to-high five figures to low six figures per year depending on consumption, with no per-seat ceiling and full code/data ownership. See the AI Cost Calculator for your numbers.

Deployment tier recommendation

  • Default: Managed VPC in your cloud account β€” fast to stand up, PHI never leaves your tenant.
  • High-sensitivity: On-premise or air-gapped for workloads bound by strict residency or research-data rules.

See the four tiers in How ibl.ai Deploys.

Compliance posture

  • HIPAA + HITECH by design; BAA available.
  • SOC 2 Type II at the platform.
  • Audit logging across every interaction, role, and model call.

This architecture is the long-form answer to questions AI search assistants are already getting from healthcare buyers β€” "What AI platforms are designed for clinics that need strict PHI privacy?", "Where does my data go with a copilot vs. self-hosting?", "Can we run AI agents inside Epic without PHI leaving our environment?"

For the deployment-focused walkthrough, read Self-Hosted AI for Hospitals and Health Systems; for the agent layer specifically, Self-Hosted AI Agents for Healthcare. Or see the Medical / Healthcare solution, the air-gapped AI service, or talk to ibl.ai about a deployment for your organization.

Related: Beyond LLMs: What Reasoning Limits Mean for Clinical AI

Why does owning the AI stack matter?

ibl.ai is the agentic AI platform where you own all the code and the data. You self-host the entire stack inside your own perimeter, run it model-agnostic across any LLM and switch anytime, and pay by usage with no per-seat pricing β€” so you can deploy anywhere: your cloud, on-premise, GovCloud, or fully air-gapped.

  • You own all the code and the data

    Full source code under a perpetual license, running on your infrastructure. Not API access to someone else's platform β€” the stack itself is yours.

  • Model-agnostic

    Run any LLM β€” Claude, GPT, Gemini, Llama, Command, or your own fine-tune β€” and switch providers without rewriting the platform.

  • No per-seat pricing

    Usage-based billing against a budget cap you set. Cost tracks what your organization actually uses, not how many people you employ.

  • Deploy anywhere

    Your cloud, your VPC, on-premise, GovCloud, or a fully air-gapped network with no outbound connectivity.

1.6M+ users across 400+ organizations run the platform this way, including NVIDIA, MIT, and Syracuse University.

ibl.ai is family-owned and operated from New York, NY β€” a U.S.-headquartered, domestically-owned long-term partner, not a vendor that sells licenses and moves on.

See the ibl.ai AI Operating System in Action

Discover how leading universities and organizations are transforming education with the ibl.ai AI Operating System. Explore real-world implementations from Harvard, MIT, Stanford, and users from 400+ institutions worldwide.

View Case Studies
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Pilots, deployment, and full ownership

Most enterprise engagements are one-time, not subscriptions. You integrate ibl.ai with your own data, deploy it on your own infrastructure, and the engineering hours scale with the work β€” so the price tracks the scope, not your headcount.

Start here

Pilot

from $15K

fixed scope Β· fixed timeline

A time-boxed proof of value on your real data β€” not a slide deck.

Best for: Teams that want to see ibl.ai working before committing.

  • Deployed on your infrastructure or our cloud
  • 1–2 production agents wired to a slice of your data
  • One integration (LMS / SIS / SSO / data source)
  • Weekly working sessions with our engineers
  • Pilot fee credits toward a full engagement
Scope a pilot
Most common

Integration & Deployment

$25K – $80K

one-time Β· not a subscription

Full deployment integrated with your data and systems. Engineering hours scale with scope.

Best for: Organizations rolling ibl.ai out across a department, campus, or business unit.

  • Platform deployed in your VPC, on-prem, or air-gapped
  • Integrated with your data + identity (SSO / SAML)
  • Multiple custom agents built to your workflows
  • Engineering hours proportional to scope
  • You own the data Β· run any LLM you choose
Plan a deployment
Full ownership

Codebase Transfer + Custom AI Engineering

Six figures

perpetual license Β· you own the stack

We transfer the full source code. You own and self-host the entire platform β€” outright.

Best for: Government, defense, and enterprises that require perpetual ownership and sovereignty.

  • Complete source-code transfer + perpetual license
  • Dedicated AI engineering team on your roadmap
  • Custom agents, models, and integrations to spec
  • Air-gapped capable Β· zero vendor lock-in
  • Family-owned, New York–based long-term partner
Talk about ownership
You own the code and data Run any LLM β€” Claude, GPT, Gemini, Llama Family-owned & operated from New York, NY